miRBase entry: cfa-mir-329b

Stem-loop cfa-mir-329b


Accession
MI0010398
Description
Canis familiaris cfa-mir-329b precursor miRNA
Gene family
MIPF0000110; mir-329


Sequence

gguaccugaagagagguuuucuggguuucuguuucuuuaaugaggaugaAACACACCUGGUUAACCUCUUUuccaguauc
(((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..)))))

Structure
     cu           uu      uuc      u  aa 
gguac  gaagagagguu  cugggu   uguuuc uu  u
|||||  |||||||||||  ||||||   |||||| ||   
cuaug  cuUUUCUCCAA  GGUCCA   ACAAag ag  g
     ac           UU      --C      u  ga 


Annotation confidence Not enough data
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Genome context
chr8: 69258528-69258607 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from cfa-mir-329b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-329b

Accession MIMAT0009899
Description Canis familiaris cfa-miR-329b mature miRNA
Sequence 50 - AACACACCUGGUUAACCUCUUU - 71
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39