miRBase entry: cfa-mir-494

Stem-loop cfa-mir-494


Accession
MI0010404
Description
Canis familiaris cfa-mir-494 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

gauacucgaaggagagguuguccguguugucuucucuuuauuuaugaUGAAACAUACACGGGAAACCUCuuuuuuaguauc
((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).))))))))))))))))))

Structure
      c            g       -   c   -  uuu 
gauacu gaaggagagguu uccgugu ugu uuc uc   a
|||||| |||||||||||| ||||||| ||| ||| ||   u
cuauga uuuuuuCUCCAA GGGCACA ACA AAG ag   u
      -            A       U   -   U  uau 


Annotation confidence Not enough data
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Genome context
chr8: 69261385-69261465 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from cfa-mir-494
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-494

Accession MIMAT0009905
Description Canis familiaris cfa-miR-494 mature miRNA
Sequence 48 - UGAAACAUACACGGGAAACCUC - 69
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39