miRBase entry: cfa-mir-875

Stem-loop cfa-mir-875

Accession

MI0010430

Description

Canis familiaris cfa-mir-875 precursor miRNA

Gene family

MIPF0000424; mir-875

Sequence

gugguacUAUACCUCAGUUUUAUCAGGUGuucuuuaaaaucaccuggaaauacugagguuguguuucacugaac
((((.((...((((((((.((.(((((((...........))))))).)).))))))))...)).)))).....

Structure

-----    u  UAU        U  A       uucu 
     gugg ac   ACCUCAGU UU UCAGGUG    u
     |||| ||   |||||||| || |||||||    u
     cacu ug   uggaguca aa gguccac    a
caagu    u  ugu        u  a       uaaa

Annotation confidence Not enough data

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Genome context

chr13: 1539078-1539151 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-875

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-875

Accession	MIMAT0009931
Description	Canis familiaris cfa-miR-875 mature miRNA
Sequence	8 - UAUACCUCAGUUUUAUCAGGUG - 29
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39