miRBase entry: cfa-mir-885

Stem-loop cfa-mir-885


Accession
MI0010432
Description
Canis familiaris cfa-mir-885 precursor miRNA
Gene family
MIPF0000532; mir-885


Sequence

ccgcgcucucUCCAUUACACUACCCUGCCUCUucuccaugagaggcagcgggguguaguggauagagcacgggu
(((.(((((.(((((((((((.(((((((((((......))))))))).))))))))))))).))))).)))..

Structure
--   c     c           A  -         cu 
  ccg gcucu UCCAUUACACU CC CUGCCUCUu  c
  ||| ||||| ||||||||||| || |||||||||   
  ggc cgaga aggugaugugg gg gacggagag  c
ug   a     u           -  c         ua 


Annotation confidence Not enough data
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Genome context
chr20: 7968529-7968602 [+]

Database links

Mature cfa-miR-885

Accession MIMAT0009933
Description Canis familiaris cfa-miR-885 mature miRNA
Sequence 11 - UCCAUUACACUACCCUGCCUCU - 32
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39