miRBase entry: osa-MIR1846e

Stem-loop osa-MIR1846e


Accession
MI0010547
Description
Oryza sativa osa-MIR1846e precursor miRNA
Gene family
MIPF0000577; MIR1846

Literature search
10 open access papers mention osa-MIR1846e
(14 sentences)

Sequence

101 reads, 87 reads per million, 2 experiments
cgcauccgcCAACGAGGAGGCCGGGACCAccggauccggugacuccggccuccucgccggcagauccgg
((.(((.(((..(((((((((((((..(((((....)))))..)))))))))))))..))).))).)).

Structure
-  c   c   AA             AC     g 
 cg auc gcC  CGAGGAGGCCGGG  CAccg a
 || ||| |||  |||||||||||||  |||||  
 gc uag cgg  gcuccuccggccu  guggc u
g  c   a   cc             ca     c 


Annotation confidence Not enough data
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Genome context
Chr9: 13211437-13211505 [-]

Database links

Mature osa-miR1846e

Accession MIMAT0010042
Description Oryza sativa osa-miR1846e mature miRNA
Sequence 10 - CAACGAGGAGGCCGGGACCA - 29
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 19103661
    Characterization and expression profiles of miRNAs in rice seeds
    "Xue LJ, Zhang JJ, Xue HW"
    "Nucleic Acids Res (2009) 37:916-930