miRBase entry: tca-mir-279b

Stem-loop tca-mir-279b


Accession
MI0010587
Description
Tribolium castaneum tca-mir-279b precursor miRNA
Gene family
MIPF0000184; mir-279

Literature search
2 open access papers mention tca-mir-279b
(8 sentences)

Sequence

gguaguuauccuaaaguuuuuGAUGGGUGAGGGUUUGGUGCAUGuuuuauuuuaaucaUGACUAGAUCCACACUCAUCCAaaaauuuggugu
((.......))..((((((((((((((((.(((((((((.((((.((......)).))))))))))))).))))))).))))))))).....GGCACAUCCGUGAUCUACCCUGUAGAUCCGGGCUUUUGUAGAAUUUUUAGAUCAGAAGCUCGUCUCUACAGGUAUCUUACGGAUGGAA

Structure
Error: Sequence and structure lengths do not match for tca-mir-279b.


Annotation confidence Not enough data
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Genome context
ChLG5: 297455-297546 [-]

Database links

Mature tca-miR-279b-3p

Accession MIMAT0010201
Description Tribolium castaneum tca-miR-279b-3p mature miRNA
Sequence 59 - UGACUAGAUCCACACUCAUCCA - 80
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-279b-5p

Accession MIMAT0019181
Description Tribolium castaneum tca-miR-279b-5p mature miRNA
Sequence 22 - GAUGGGUGAGGGUUUGGUGCAUG - 44
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696