miRBase entry: tca-mir-993

Stem-loop tca-mir-993


Accession
MI0010588
Description
Tribolium castaneum tca-mir-993 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

ggcacauccgugaucUACCCUGUAGAUCCGGGCUUuuguagaauuuuuagaucaGAAGCUCGUCUCUACAGGUAUCUuacggauggaa
....(((((((((..((((.((((((..((((((((((..............))))))))))..))))))))))..)))))))))...GGCGCGCUCCGAUUGGACCCUGGGGUGGAAAGUUGUACCGCUGAUGGUGAUUUUUCUACACAUAAGCGUAUAGCUUUUCCCCUUUGGUUCCAAUCACGACGAUC

Structure
Error: Sequence and structure lengths do not match for tca-mir-993.


Annotation confidence Not enough data
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Genome context
ChLG2: 8141702-8141789 [-]

Database links

Mature tca-miR-993-3p

Accession MIMAT0010094
Description Tribolium castaneum tca-miR-993-3p mature miRNA
Sequence 55 - GAAGCUCGUCUCUACAGGUAUCU - 77
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-993-5p

Accession MIMAT0019182
Description Tribolium castaneum tca-miR-993-5p mature miRNA
Sequence 16 - UACCCUGUAGAUCCGGGCUU - 35
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696