miRBase entry: bmo-mir-970

Stem-loop bmo-mir-970


Accession
MI0010622
Description
Bombyx mori bmo-mir-970 precursor miRNA
Gene family
MIPF0000700; mir-970

Literature search
2 open access papers mention bmo-mir-970
(3 sentences)

Sequence

833 reads, 172 reads per million, 3 experiments
uggaggaauagacagAGCCUUGCGUGUGCUCUUAUUGGUAgugugacugauaaucuaUCAUAAGACACACGCGGCUCUgucugacuccagcg
(((((...(((((((((((..(((((((.((((((.(((((.((........))))))))))))))))))))))))))))))).)))))...AUAUAAAUGGCUGCAUAGCUAAACGGGAGAAGCUAUAGCGCUAUAUGUCAAUAUUAAAAUCAUAAGCGUAUAGCUUUUCCCCUUGGUUAUGCAUGCAUAUUCUC

Structure
Error: Sequence and structure lengths do not match for bmo-mir-970.


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004582019.1: 2368588-2368679 [+]

Database links

Mature bmo-miR-970-5p

Accession MIMAT0015294
Description Bombyx mori bmo-miR-970-5p mature miRNA
Sequence 16 - AGCCUUGCGUGUGCUCUUAUUGGUA - 40
Evidence experimental
Illumina [2]

Mature bmo-miR-970-3p

Accession MIMAT0010125
Description Bombyx mori bmo-miR-970-3p mature miRNA
Sequence 58 - UCAUAAGACACACGCGGCUCU - 78
Evidence experimental
Illumina [2]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148