Stem-loop sja-mir-125b

Accession

MI0010672

Description

Schistosoma japonicum sja-mir-125b precursor miRNA

Gene family

MIPF0000033; mir-10

Literature search

8 open access papers mention sja-mir-125b
(27 sentences)

Sequence

aUCCCUGAGACUGAUAAUUGCUCuaguuauuauaucauuaaugaguuuacaauaagggcaauuauuauucucaggugu
...(((((((.((((((((((((((.((((((......)))))).)........))))))))))))).)))))))...

Structure

aUC       C             -------- g      ua 
   CCUGAGA UGAUAAUUGCUCu        a uuauua  u
   ||||||| |||||||||||||        | ||||||   
   ggacucu auuauuaacggga        u aguaau  c
ugu       u             auaacauu g      ua 

Annotation confidence Not enough data

Genome context

CABF01027351.1: 4363-4440 [-]

Mature sja-miR-125b

• Accession: MIMAT0010179
• Description: Schistosoma japonicum sja-miR-125b mature miRNA
• Sequence: 2 - UCCCUGAGACUGAUAAUUGCUC - 23
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 19107204
   Identification and characterization of novel microRNAs from Schistosoma japonicum
   Xue X, Sun J, Zhang Q, Wang Z, Huang Y, Pan W
   PLoS One (2008) 3:e4034


2. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596