miRBase entry: ssc-mir-124a-1

Stem-loop ssc-mir-124a-1


Accession
MI0010680
Description
Sus scrofa ssc-mir-124a-1 precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
15 open access papers mention ssc-mir-124a-1
(81 sentences)

Sequence

ucaagaccagacucugcccuccguguucacagcggaccuugauuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAagagcggagccuacggcugcacuuga
(((((..(((.((((((.((..((((((((.(((..((((((((...........))))))))..))).))))))))..)).))))))((...)))))..)))))

Structure
     ac   ------a      c  cc        a   ga        uaau 
ucaag  cag       cucugc cu  guguucac gcg  ccuugauu    g
|||||  |||       |||||| ||  |||||||| |||  ||||||||    u
aguuc  guc       gaggcg ga  CGUAAGUG CGC  GGAAUuaa    c
     ac   ggcaucc      a  AC        G   AC        caua 


Annotation confidence Not enough data
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Genome context
chr4: 76136453-76136557 [-]

Database links

Mature ssc-miR-124a

Accession MIMAT0002156
Description Sus scrofa ssc-miR-124a mature miRNA
Sequence 59 - UAAGGCACGCGGUGAAUGCCA - 79
Evidence experimental
454 [1], Illumina [2]

References

  1. PubMed ID: 19196471
    Cloning, characterization and expression analysis of porcine microRNAs
    Reddy AM, Zheng Y, Jagadeeswaran G, Macmil SL, Graham WB, Roe BA, Desilva U, Zhang W, Sunkar R
    BMC Genomics (2009) 10:65

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100