miRBase entry: pvu-MIR2118

Stem-loop pvu-MIR2118


Accession
MI0010699
Description
Phaseolus vulgaris pvu-MIR2118 precursor miRNA
Gene family
MIPF0000745; MIR2118

Literature search
3 open access papers mention pvu-MIR2118
(11 sentences)

Sequence

aagagcuuaaggaagugaugggagauggguggguugguaaaacauaagagaaugaauauuucucacucuguuUUGCCGAUUCCACCCAUUCCUAugauuuccuuugcuuccucucuuuccacucu
..((((..((((((((.(((((((.(((((((((((((((((((...(((((.......)))))....))))))))))).))))))))))))))).)))))))).))))................

Structure
--------------aa    uu        g       a        -           -uaa     ug 
                gagc  aaggaagu augggag uggguggg uugguaaaaca    gagaa  a
                ||||  |||||||| ||||||| |||||||| |||||||||||    |||||  a
                uucg  uuccuuua uAUCCUU ACCCACCU AGCCGUUuugu    cucuu  u
ucucaccuuucucucc    -u        g       -        U           cuca     ua 


Annotation confidence Not enough data
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Genome context
chr7: 2635274-2635398 [+]

Database links

Mature pvu-miR2118

Accession MIMAT0011169
Description Phaseolus vulgaris pvu-miR2118 mature miRNA
Sequence 73 - UUGCCGAUUCCACCCAUUCCUA - 94
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19353277
    Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress
    "Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL"
    "Plant Mol Biol (2009) 70:385-401