miRBase entry: gma-MIR167f

Stem-loop gma-MIR167f


Accession
MI0010726
Description
Glycine max gma-MIR167f precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
26 open access papers mention gma-MIR167f
(194 sentences)

Sequence

ucaugcaccacuaccaguUGAAGCUGCCAGCAUGAUCUUaacuucccucacuugcuguggaaagaucagaucauguggcaguuucaccuaguaguuguuggccgcauga
((((((.(((((((.((.(((((((((((.((((((((...(((.((.((.....)).)).)))...))))))))))))))))))).)).)))))....))..))))))

Structure
      -a  ----     c  u           G        Uaa   c  u  c 
ucaugc  cc    acuac ag UGAAGCUGCCA CAUGAUCU   cuu cc ca u
||||||  ||    ||||| || ||||||||||| ||||||||   ||| || || u
aguacg  gg    ugaug uc acuuugacggu guacuaga   gaa gg gu g
      cc  uugu     a  c           -        cua   a  u  c 


Annotation confidence Not enough data
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Genome context
chr10: 47144841-47144949 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR167f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gma-miR167f

Accession MIMAT0011197
Description Glycine max gma-miR167f mature miRNA
Sequence 19 - UGAAGCUGCCAGCAUGAUCUU - 39
Evidence experimental
cloned [1], Northern [1]

References

  1. PubMed ID: 19084500
    Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
    "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
    "Biochem Biophys Res Commun (2009) 378:799-803