Stem-loop sequence gma-MIR172e

Accession

MI0010729 (change log)

Description

Glycine max miR172e stem-loop

Gene family

MIPF0000035; MIR172

Literature search

28 open access papers mention gma-MIR172e
(122 sentences)

Stem-loop

   aaaac     cugu    c g  g                a  -   uuu       au     u     a   g ucc 
5'      aguca    uugc g ug agcaucaucaagauuc ca agc   agggggc  uaauu guuug ggu g   c
        |||||    |||| | || |||||||||||||||| || |||   |||||||  ||||| ||||| ||| |    
3'      ucagu    aacg c ac ucguaguaguucuaag gu ucg   uuucccg  auuaa caaac cua u   u
   -auaa     aaau    a g  g                g  a   --u       --     c     -   g uau 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr11: 31482550-31482702 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0010729

Mature sequence gma-miR172e

• Accession: MIMAT0011200
• Sequence: 114 - ggaaucuugaugaugcugcagcag - 137
• Evidence: experimental; cloned [1], Northern [1]

References

1. PMID:19084500 "Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules" Wang Y, Li P, Cao X, Wang X, Zhang A, Li X Biochem Biophys Res Commun. 378:799-803(2009).