miRBase entry: sme-mir-753c

Stem-loop sme-mir-753c


Accession
MI0010822
Description
Schmidtea mediterranea sme-mir-753c precursor miRNA
Gene family
MIPF0000752; mir-753


Sequence

uuuuaauaaaguauauuuaaAAGCUUGGAUUGUGAUCUCAuauauuuaugagaucauuauucaagcucuuaaauaauacuuuucaucaac
.......(((((((((((((.(((((((((.(((((((((((....))))))))))).))))))))).)))))).)))))))........

Structure
-uuuuaau       -      A         U           u 
        aaaguau auuuaa AGCUUGGAU GUGAUCUCAua a
        ||||||| |||||| ||||||||| |||||||||||  
        uuucaua uaaauu ucgaacuua uacuagaguau u
caacuacu       a      c         u           u 


Annotation confidence Not enough data
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Genome context
Contig9004: 3190-3279 [+]

Database links

Mature sme-miR-753c

Accession MIMAT0011277
Description Schmidtea mediterranea sme-miR-753c mature miRNA
Sequence 21 - AAGCUUGGAUUGUGAUCUCA - 40
Evidence experimental
454 [1], Illumina [1]

References

  1. PubMed ID: 19564616
    High-resolution profiling and discovery of planarian small RNAs
    "Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N"
    "Proc Natl Acad Sci U S A (2009) 106:11546-11551