miRBase entry: sbi-MIR437b

Stem-loop sbi-MIR437b


Accession
MI0010903
Description
Sorghum bicolor sbi-MIR437b precursor miRNA
Gene family
MIPF0000746; MIR437

Literature search
3 open access papers mention sbi-MIR437b
(5 sentences)

Sequence

ucaaacuucucuaauuuugaucaauguuauacaaaaauauauuagcauauacaauacuaaauaaaagcauuaucaagacauauuucaugguagauguaaugaaauaauuugauguuucagauguuggugcauuuuucuauaaacuuggucAAAGUUAGAGAAGUUUGACUU
((((((((((((((((((((((((..(((((.((((((.(((((((((..................(((((((((.((......)).)))).)))))..(((((((......))))))).))))))))).)))))).)))))..))))))))))))))))))))))))...

Structure
---                        ug     c      a         -----auacaauacuaaauaaaa     -    a  ca 
   ucaaacuucucuaauuuugaucaa  uuaua aaaaau uauuagcau                       gcauu auca ga  u
   ||||||||||||||||||||||||  ||||| |||||| |||||||||                       ||||| |||| ||   
   AGUUUGAAGAGAUUGAAAcugguu  aauau uuuuua gugguugua                       uguag uggu cu  a
UUC                        ca     c      c         gacuuuguaguuuaauaaaguaa     a    a  uu 


Annotation confidence Not enough data
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Genome context
chr1: 19748293-19748463 [+]

Database links

Mature sbi-miR437b

Accession MIMAT0011363
Description Sorghum bicolor sbi-miR437b mature miRNA
Sequence 151 - AAAGUUAGAGAAGUUUGACUU - 171
Evidence not_experimental

References

  1. PubMed ID: 19189423
    The Sorghum bicolor genome and the diversification of grasses
    "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
    "Nature (2009) 457:551-556