miRBase entry: sme-mir-753e

Stem-loop sme-mir-753e


Accession
MI0010934
Description
Schmidtea mediterranea sme-mir-753e precursor miRNA
Gene family
MIPF0000752; mir-753


Sequence

uaAGGCUUGAAUUGUGAUCUCAuaaaccuaUGAGAUCAUUAUUCAAGCUCUUCaaua
.(((((((((((.(((((((((((....))))))))))).)))))))).))).....

Structure
----u   -        U           a 
     aAG GCUUGAAU GUGAUCUCAua a
     ||| |||||||| |||||||||||  
     UUC CGAACUUA UACUAGAGUau c
auaaC   U        U           c 


Annotation confidence Not enough data
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Comments
This sequence was named mir-753g in [1].

Genome context
Contig7504: 7763-7819 [+]

Database links

Mature sme-miR-753e-5p

Accession MIMAT0012168
Description Schmidtea mediterranea sme-miR-753e-5p mature miRNA
Sequence 3 - AGGCUUGAAUUGUGAUCUCA - 22
Evidence experimental
Illumina [1]

Mature sme-miR-753e-3p

Accession MIMAT0012169
Description Schmidtea mediterranea sme-miR-753e-3p mature miRNA
Sequence 31 - UGAGAUCAUUAUUCAAGCUCUUC - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19553344
    Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
    "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
    "RNA (2009) 15:1483-1491