Stem-loop zma-MIR2275d

Accession

MI0011281

Description

Zea mays zma-MIR2275d precursor miRNA

Literature search

10 open access papers mention zma-MIR2275d
(16 sentences)

Sequence

gucaggcacuaaaagugAGAGUUGGAGGAAAGAAAACUaaucggcuaucagauucugcaauggcuugaugcauaaacaugauugccguuccgUUUGUUUUCCUCUAAUAUCUCAccuuca
..............((((((((((((((((((.((((....((((.((((.....((((.........))))......)))).))))....)))).)))))))))))).)))))).....

Structure

gucaggcacuaaaa      -            A    Uaau    u    -gauuc    aug 
              gugAGA GUUGGAGGAAAG AAAC    cggc auca      ugca   g
              |||||| |||||||||||| ||||    |||| ||||      ||||   c
              cACUCU UAAUCUCCUUUU UUUg    gccg uagu      acgu   u
---------acuuc      A            G    ccuu    u    acaaau    agu 

Annotation confidence Not enough data

Genome context

chr2: 207980073-207980192 [+]

Mature zma-miR2275d-5p

• Accession: MIMAT0011773
• Description: Zea mays zma-miR2275d-5p mature miRNA
• Sequence: 18 - AGAGUUGGAGGAAAGAAAACU - 38
• Evidence: not_experimental

Mature zma-miR2275d-3p

• Accession: MIMAT0011774
• Description: Zea mays zma-miR2275d-3p mature miRNA
• Sequence: 93 - UUUGUUUUCCUCUAAUAUCUCA - 114
• Evidence: not_experimental

References

1. PubMed ID: 19584097
   Clusters and superclusters of phased small RNAs in the developing inflorescence of rice
   "Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH"
   "Genome Res (2009) 19:1429-1440