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miRBase |
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Stem-loop sequence dme-mir-2279 |
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Accession | MI0011289 (change log) | ||||
Description | Drosophila melanogaster miR-2279 stem-loop | ||||
Literature search |
1 open access papers mention dme-mir-2279 | ||||
Stem-loop |
- gagagg aaa -uu u g u a 5' cgg auuaug gacaa ugaaa uaaauaucu ugugugaaauua uu a ||| |||||| ||||| ||||| ||||||||| |||||||||||| || 3' gcc uaauau cuguu auuuu auuuauaga gcgcacuuuaau ag a g ----aa -cc uac u a u a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence dme-miR-2279-5p |
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Accession | MIMAT0011784 |
Previous IDs | dme-miR-2279* |
Sequence |
31 - uuaaauaucugugugugaaauu - 52 |
Deep sequencing | 345 reads, 44 experiments |
Evidence | experimental; 454 [1], Illumina [2] |
Database links |
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Predicted targets |
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Mature sequence dme-miR-2279-3p |
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Accession | MIMAT0011785 |
Previous IDs | dme-miR-2279 |
Sequence |
67 - uuucacgcgaagauauuuauuu - 88 |
Deep sequencing | 49 reads, 13 experiments |
Evidence | experimental; 454 [1], Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:19541914
"Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line"
Genome Res. 19:1776-1785(2009).
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2 |
PMID:20037610
"Evolutionary flux of canonical microRNAs and mirtrons in Drosophila"
Nat Genet. 42:6-9(2010).
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