miRBase entry: bta-mir-2289

Stem-loop bta-mir-2289


Accession
MI0011298
Description
Bos taurus bta-mir-2289 precursor miRNA


Sequence

16 reads, 3 reads per million, 6 experiments
gccuucgguugucgcgcgagcucgggcucugcgcucggaugccggcUCGUGUUCGAGCUCGCGUCCcauggggc
(((((.((.....((((((((((((((..((.((.(((...))))).)).))))))))))))))))...)))))

Structure
     --c  uuguc              uc  c  u   a 
gccuu   gg     gcgcgagcucgggc  ug gc cgg  
|||||   ||     ||||||||||||||  || || ||| u
cgggg   CC     UGCGCUCGAGCUUG  GC cg gcc  
     uac  -----              -U  U  -   g 


Annotation confidence Not enough data
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Genome context
chr1: 148643536-148643609 [-]

Database links

Mature bta-miR-2289

Accession MIMAT0011796
Description Bos taurus bta-miR-2289 mature miRNA
Sequence 47 - UCGUGUUCGAGCUCGCGUCC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349