miRBase entry: bta-mir-2339

Stem-loop bta-mir-2339


Accession
MI0011366
Description
Bos taurus bta-mir-2339 precursor miRNA

Literature search
3 open access papers mention bta-mir-2339
(6 sentences)

Sequence

183 reads, 9 reads per million, 53 experiments
aggucugggcuccugcugcccagucugaggucugcacucuuugccUCACUGGACCUAGCAGAGCUcccacuu
.(((..((((((.(((((.(((((..(((((...........))))))))))...)))))))))))..))).

Structure
a   cu      c     --c     cu     cugc 
 ggu  gggcuc ugcug   ccagu  gaggu    a
 |||  |||||| |||||   |||||  |||||    c
 uca  cUCGAG ACGAU   GGUCA  CUccg    u
u   cc      -     CCA     --     uuuc 


Annotation confidence Not enough data
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Genome context
chr19: 32129951-32130022 [-]

Database links

Mature bta-miR-2339

Accession MIMAT0011873
Description Bos taurus bta-miR-2339 mature miRNA
Sequence 46 - UCACUGGACCUAGCAGAGCU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349