miRBase entry: bta-mir-2378

Stem-loop bta-mir-2378


Accession
MI0011413
Description
Bos taurus bta-mir-2378 precursor miRNA


Sequence

6 reads, 3 reads per million, 4 experiments
ugggaaggaguguucauggucucaggcuccacuuagcagaggcuucUGUGGGUUGUCUGAGCAAGGGucuuccuccca
(((((.((((.(.((...(.((((((((((((..(((....)))...)))))..))))))))...)).))))))))))

Structure
     a    u u  aug u       --     -uu   a 
uggga ggag g uc   g cucaggc  uccac   agc g
||||| |||| | ||   | |||||||  |||||   |||  
acccu ccuu c GG   C GAGUCUG  GGGUG   ucg a
     -    - u  GAA -       UU     Ucu   g 


Annotation confidence Not enough data
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Genome context
chr23: 28284050-28284127 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2378
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2378

Accession MIMAT0011924
Description Bos taurus bta-miR-2378 mature miRNA
Sequence 47 - UGUGGGUUGUCUGAGCAAGGG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349