miRBase entry: bta-mir-2398

Stem-loop bta-mir-2398


Accession
MI0011439
Description
Bos taurus bta-mir-2398 precursor miRNA


Sequence

33 reads, 5 reads per million, 10 experiments
cucggggugagcAUCUAGGGACGCGUCGGCAACUgcaggacccccugguugccuccccgccccucuugcugaccccggg
((((((((.((((...((((.((.(..((((((..((((....))))))))))..).)).))))..)))).))))))))

Structure
        g    UCU    A  C UC      Ug    a 
cucggggu agcA   AGGG CG G  GGCAAC  cagg c
|||||||| ||||   |||| || |  ||||||  ||||  
gggcccca ucgu   uccc gc c  ccguug  gucc c
        g    -uc    c  c cu      --    c 


Annotation confidence Not enough data
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Genome context
chr27: 18543429-18543507 [-]

Database links

Mature bta-miR-2398

Accession MIMAT0011953
Description Bos taurus bta-miR-2398 mature miRNA
Sequence 13 - AUCUAGGGACGCGUCGGCAACU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349