miRBase entry: bta-mir-2442

Stem-loop bta-mir-2442


Accession
MI0011495
Description
Bos taurus bta-mir-2442 precursor miRNA


Sequence

2 reads, 1 reads per million, 2 experiments
gcgccaccacAGAGCAGGGGCUGUGGGCUGCAgcaccaugaagagguucccagcacccagugucugcuugucuugc
..((....(((.((((((.((((.((((((....(((.......)))...)))).)))))).)))))))))...))

Structure
gc  cacc   G      G    U  -    CAgc   au 
  gc    acA AGCAGG GCUG GG GCUG    acc  g
  ||    ||| |||||| |||| || ||||    |||  a
  cg    ugu ucgucu ugac cc cgac    ugg  a
--  -uuc   -      g    -  a    -ccu   ag 


Annotation confidence Not enough data
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Genome context
chr5: 113966426-113966501 [-]

Database links

Mature bta-miR-2442

Accession MIMAT0012017
Description Bos taurus bta-miR-2442 mature miRNA
Sequence 11 - AGAGCAGGGGCUGUGGGCUGCA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349