miRBase entry: dme-mir-2500

Stem-loop dme-mir-2500


Accession
MI0011589
Description
Drosophila melanogaster dme-mir-2500 precursor miRNA


Sequence

235 reads, 49 reads per million, 39 experiments
GUAAGGAACACACAUAUACAAUACCguuugaauuucaaauaaucaGGAUUUUGUGUGUGGACCUCAGa
...(((..((((((((...(((.((((((((...)))))).....))))).))))))))..)))....

Structure
-GUA   AA        UAC   A  -----      a 
    AGG  CACACAUA   AAU CC     guuuga  
    |||  ||||||||   ||| ||     |||||| u
    UCC  GUGUGUGU   UUA GG     uaaacu  
aGAC   AG        --U   -  acuaa      u 


Annotation confidence Not enough data
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Genome context
chr3L: 16998457-16998524 [-]

Database links

Mature dme-miR-2500-5p

Accession MIMAT0012214
Description Drosophila melanogaster dme-miR-2500-5p mature miRNA
Sequence 1 - GUAAGGAACACACAUAUACAAUACC - 25
Evidence experimental
Illumina [1]
Database links

Mature dme-miR-2500-3p

Accession MIMAT0012215
Description Drosophila melanogaster dme-miR-2500-3p mature miRNA
Sequence 46 - GGAUUUUGUGUGUGGACCUCAG - 67
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9