miRBase entry: dps-mir-981

Stem-loop dps-mir-981


Accession
MI0011592
Description
Drosophila pseudoobscura dps-mir-981 precursor miRNA
Gene family
MIPF0000710; mir-981


Sequence

uccacauugaaauCGGGUUUCGUUAACAGCGGGCUguuaugaauaaaucaacaagUUCGUUGUCGACGAAACCUGCAugcuguguggag
(((((((.(....(((((((((((.(((((((((((((((......)).))).)))))))))).)))))))))))....).))))))).

Structure
-       u aaau           A          -   -  ga 
 uccacau g    CGGGUUUCGUU ACAGCGGGCU guu au  a
 ||||||| |    ||||||||||| |||||||||| ||| ||   
 aggugug c    GUCCAAAGCAG UGUUGCUUga caa ua  u
g       u guAC           C          a   c  aa 


Annotation confidence Not enough data
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Genome context
XL_group1a: 4258928-4259016 [-]

Database links

Mature dps-miR-981-5p

Accession MIMAT0012219
Description Drosophila pseudoobscura dps-miR-981-5p mature miRNA
Sequence 14 - CGGGUUUCGUUAACAGCGGGCU - 35
Evidence experimental
Illumina [1]

Mature dps-miR-981-3p

Accession MIMAT0012220
Description Drosophila pseudoobscura dps-miR-981-3p mature miRNA
Sequence 56 - UUCGUUGUCGACGAAACCUGCA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9