miRBase entry: dps-mir-970

Stem-loop dps-mir-970


Accession
MI0011593
Description
Drosophila pseudoobscura dps-mir-970 precursor miRNA
Gene family
MIPF0000700; mir-970


Sequence

ggcaucuguugcAGCUAGCGGGUGUUUUAUCUGGUAgcuguacccuuuugaaucuaUCAUAAGACACACGCGGCUAUgaccgaugccc
((((((.((((.((((.(((.((((((((..((((((...((......))...)))))))))))))).))))))).)))).)))))).

Structure
-      u    c    A   G        UC      cug  cc 
 ggcauc guug AGCU GCG GUGUUUUA  UGGUAg   ua  c
 |||||| |||| |||| ||| ||||||||  ||||||   ||   
 ccguag cagU UCGG CGC CACAGAAU  ACUauc   gu  u
c      c    A    -   A        --      uaa  uu 


Annotation confidence Not enough data
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Genome context
XL_group1a: 3316436-3316523 [+]

Database links

Mature dps-miR-970-5p

Accession MIMAT0012221
Description Drosophila pseudoobscura dps-miR-970-5p mature miRNA
Sequence 13 - AGCUAGCGGGUGUUUUAUCUGGUA - 36
Evidence experimental
Illumina [1]

Mature dps-miR-970-3p

Accession MIMAT0012222
Description Drosophila pseudoobscura dps-miR-970-3p mature miRNA
Sequence 57 - UCAUAAGACACACGCGGCUAU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9