miRBase entry: dps-mir-987

Stem-loop dps-mir-987


Accession
MI0011600
Description
Drosophila pseudoobscura dps-mir-987 precursor miRNA
Gene family
MIPF0000859; mir-987


Sequence

cagaaauaauguuggacugugcuUAAAGUAAAUAGUCUGGAUUGAUGaaaguuauauucaagaauuCAUCAACAGGCAUUUACUUCAACUgcaguuuaaacgauaugcaacug
(((..(((.((((((((((((.((.((((((((.(((((..((((((((...............))))))))))))))))))))).)).)))))))).)))).)))....)))

Structure
   --aa   a    -        c  A        A     GA        aguuau 
cag    aua uguu ggacugug uU AAGUAAAU GUCUG  UUGAUGaa      a
|||    ||| |||| |||||||| || |||||||| |||||  ||||||||      u
guc    uau gcaa uuugacgU AA UUCAUUUA CGGAC  AACUACuu      u
   aacg   a    a        C  C        -     --        aagaac 


Annotation confidence Not enough data
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Genome context
3: 9267906-9268018 [-]

Database links

Mature dps-miR-987-5p

Accession MIMAT0012235
Description Drosophila pseudoobscura dps-miR-987-5p mature miRNA
Sequence 24 - UAAAGUAAAUAGUCUGGAUUGAUG - 47
Evidence experimental
Illumina [1]

Mature dps-miR-987-3p

Accession MIMAT0012236
Description Drosophila pseudoobscura dps-miR-987-3p mature miRNA
Sequence 67 - CAUCAACAGGCAUUUACUUCAACU - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9