miRBase entry: dps-mir-2514

Stem-loop dps-mir-2514


Accession
MI0011641
Description
Drosophila pseudoobscura dps-mir-2514 precursor miRNA


Sequence

aaauugggucacUUACAGCUUCAAUACAGUGGUCCaucgcugaaaggcgccuuucguguuggagcugugaaaacaagguu
.((((..((...(((((((((((((((((((......))))(((((....))))))))))))))))))))..))..))))

Structure
a    gg  cac               --------------    GU 
 aauu  gu   UUACAGCUUCAAUAC              AGUG  C
 ||||  ||   |||||||||||||||              ||||   
 uugg  ca   agugucgagguugug              ucgc  C
-    aa  -aa               cuuuccgcggaaag    ua 


Annotation confidence Not enough data
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Genome context
Unknown_group_258: 6689-6768 [-]

Database links

Mature dps-miR-2514

Accession MIMAT0012299
Description Drosophila pseudoobscura dps-miR-2514 mature miRNA
Sequence 13 - UUACAGCUUCAAUACAGUGGUCC - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9