miRBase entry: dps-mir-2515

Stem-loop dps-mir-2515


Accession
MI0011642
Description
Drosophila pseudoobscura dps-mir-2515 precursor miRNA


Sequence

ccuaggauacgccUGAUGAGUGUUUUCCCAAUUUgacuguggugguuguggguagacccuacagccucuauaauuggcagugugggagccaacacaguuggcacacuuggg
((((((....(((.(((..(((((((((((..(((..(((((.(((((((((.....))))))))).))))).....)))..))))))..))))).))))))...))))))

Structure
      auac   U   GA     --      AU   ---ac     u         u 
ccuagg    gcc GAU  GUGUU  UUCCCA  UUg     ugugg gguuguggg a
||||||    ||| |||  |||||  ||||||  |||     ||||| ||||||||| g
ggguuc    cgg uug  cacaa  gagggu  gac     auauc ccgacaucc a
      -aca   -   -a     cc      gu   gguua     u         c 


Annotation confidence Not enough data
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Genome context
Unknown_singleton_3915: 296-406 [-]

Database links

Mature dps-miR-2515

Accession MIMAT0012300
Description Drosophila pseudoobscura dps-miR-2515 mature miRNA
Sequence 14 - UGAUGAGUGUUUUCCCAAUUU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9