miRBase entry: dps-mir-2519

Stem-loop dps-mir-2519


Accession
MI0011652
Description
Drosophila pseudoobscura dps-mir-2519 precursor miRNA


Sequence

gugccuggcggccggauugaauaacGUAUGUGGAAUUGAAGUUGAUAUacauuccaugaacauuugagggacaucaauuucuuuuucaauuacaguucuucuuguucccggcccugca
.(((..((.((((((...(((.((((((..(((((..(((((((((.....((((.(((....))).)))).)))))))))..)))))..))).))).)))......)))))))))))

Structure
g   cu  c      ---auu   u   -   UG     UU         AUaca    a   a 
 ugc  gg ggccgg      gaa aac GUA  UGGAA  GAAGUUGAU     uucc uga c
 |||  || ||||||      ||| ||| |||  |||||  |||||||||     |||| |||  
 acg  uc ccggcc      cuu uug cau  acuuu  cuuuaacua     aggg guu a
-   --  -      cuuguu   c   a   ua     uu         ----c    a   u 


Annotation confidence Not enough data
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Genome context
XL_group1e: 8341045-8341162 [-]

Database links

Mature dps-miR-2519

Accession MIMAT0012307
Description Drosophila pseudoobscura dps-miR-2519 mature miRNA
Sequence 26 - GUAUGUGGAAUUGAAGUUGAUAU - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9