miRBase entry: dps-mir-2527

Stem-loop dps-mir-2527


Accession
MI0011661
Description
Drosophila pseudoobscura dps-mir-2527 precursor miRNA


Sequence

ucguauucaaUGAUGGAUGUAGGUGUAGAGAgaaagggcgcaccagucaaaaaaagagauuggcuuucguugucugcuguaacuuuacucucugccucuauuuucaugacugacuaugag
(((((.(((.(.(((((.(((((.((((((((.((((..(((.(((.(((..((((.......))))..))).))).)))..)))).)))))))).))))).))))).).))).))))).

Structure
-     u   a G     U     U        a    gc   c   u   aa    ag 
 ucgua uca U AUGGA GUAGG GUAGAGAg aagg  gca cag caa  aaag  a
 ||||| ||| | ||||| ||||| |||||||| ||||  ||| ||| |||  ||||  u
 aguau agu a uacuu uaucu cgucucuc uuuc  ugu guc guu  uuuc  u
g     c   c g     u     c        a    aa   c   u   gc    gg 


Annotation confidence Not enough data
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Genome context
XL_group1e: 10071219-10071338 [+]

Database links

Mature dps-miR-2527

Accession MIMAT0012317
Description Drosophila pseudoobscura dps-miR-2527 mature miRNA
Sequence 11 - UGAUGGAUGUAGGUGUAGAGA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9