miRBase entry: dps-mir-2566a-2

Stem-loop dps-mir-2566a-2


Accession
MI0011712
Description
Drosophila pseudoobscura dps-mir-2566a-2 precursor miRNA
Gene family
MIPF0000880; mir-2566


Sequence

aauuugcauuucaaUUUAGAAACACAAAUCAUGUGUgguauguuuuaacucaUACAUAACUUGUGUCUCUUAGAUcaaaugugagu
.((((((((((..(((((((.((((((...(((((((((........)).)))))))...)))))).)).))))).))))))))))

Structure
a          ca     -  A      AUC       -  aug 
 auuugcauuu  aUUUA GA ACACAA   AUGUGUg gu   u
 ||||||||||  ||||| || ||||||   ||||||| ||    
 ugaguguaaa  UAGAU CU UGUGUU   UACAUac ca   u
-          -c     U  C      CAA       u  auu 


Annotation confidence Not enough data
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Genome context
4_group4: 3553033-3553118 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from dps-mir-2566a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-2566a-3p

Accession MIMAT0012395
Description Drosophila pseudoobscura dps-miR-2566a-3p mature miRNA
Sequence 53 - UACAUAACUUGUGUCUCUUAGAU - 75
Evidence experimental
Illumina [1]

Mature dps-miR-2566a-2-5p

Accession MIMAT0016970
Description Drosophila pseudoobscura dps-miR-2566a-2-5p mature miRNA
Sequence 15 - UUUAGAAACACAAAUCAUGUGU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9