miRBase entry: dps-mir-2575

Stem-loop dps-mir-2575


Accession
MI0011726
Description
Drosophila pseudoobscura dps-mir-2575 precursor miRNA


Sequence

ccaaaccgucugcgugugcuucuUUUGUUACUGAUGGUGCUGUCgguccauauucguuaagcCAGCGUCAUCAGUGGCAACAGccgcaccgcaacccaacccccagaagaacgaguaugg
(((.((((((((((.((((..((.((((((((((((((((((.(................).)))))))))))))))))).))..)))))))...............)).))).)).)))

Structure
   a  -   -  ---------------   u    uu  U                  U gguccau 
cca ac cgu cu               gcg gugc  cu UUGUUACUGAUGGUGCUG C       a
||| || ||| ||               ||| ||||  || |||||||||||||||||| |        
ggu ug gca ga               cgc cacg  GA AACGGUGACUACUGCGAC g       u
   a  a   a  agacccccaacccaa   -    cc  C                  c aauugcu 


Annotation confidence Not enough data
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Genome context
2: 14879908-14880027 [+]

Database links

Mature dps-miR-2575-5p

Accession MIMAT0012420
Description Drosophila pseudoobscura dps-miR-2575-5p mature miRNA
Sequence 24 - UUUGUUACUGAUGGUGCUGUC - 44
Evidence experimental
Illumina [1]

Mature dps-miR-2575-3p

Accession MIMAT0012421
Description Drosophila pseudoobscura dps-miR-2575-3p mature miRNA
Sequence 63 - CAGCGUCAUCAGUGGCAACAG - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9