miRBase entry: dsi-mir-965

Stem-loop dsi-mir-965


Accession
MI0011754
Description
Drosophila simulans dsi-mir-965 precursor miRNA
Gene family
MIPF0000708; mir-965


Sequence

gcucaacauuuuggGGGGUGAAACUGUACGUUAUAUGugcccuucugugaaauucaUAAGCGUAUAGCUUUUCCCCUUaaaaguuagagcu
(((((((.((((((((((.(((.(((((((((.((((.................))))))))))))).))).))))))))))))).)))).

Structure
-    -   a          U   A         A    ugcccuu 
 gcuc aac uuuuggGGGG GAA CUGUACGUU UAUG       c
 |||| ||| |||||||||| ||| ||||||||| ||||       u
 cgag uug aaaaUUCCCC UUU GAUAUGCGA AUac       g
u    a   -          U   C         -    uuaaagu 


Annotation confidence Not enough data
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Genome context
chr2L: 248267-248357 [-]

Database links

Mature dsi-miR-965-5p

Accession MIMAT0012471
Description Drosophila simulans dsi-miR-965-5p mature miRNA
Sequence 15 - GGGGUGAAACUGUACGUUAUAUG - 37
Evidence experimental
Illumina [1]

Mature dsi-miR-965-3p

Accession MIMAT0012472
Description Drosophila simulans dsi-miR-965-3p mature miRNA
Sequence 57 - UAAGCGUAUAGCUUUUCCCCUU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9