miRBase entry: dsi-mir-964

Stem-loop dsi-mir-964


Accession
MI0011756
Description
Drosophila simulans dsi-mir-964 precursor miRNA
Gene family
MIPF0000949; mir-964


Sequence

uugguccaacuugccUUAGAAUAGGGGAGCUUAACUUguguuuuuaauguuuaagUUAAAAGCCACUGUUCUAAGACaauuugaugaucaaa
(((((((((.(((.((((((((((.((...((((((((.............))))))))...)).)))))))))).))).)))..)))))).

Structure
-      --   c   c          G  AGC        uguuu 
 uugguc  caa uug cUUAGAAUAG GG   UUAACUUg     u
 ||||||  ||| ||| |||||||||| ||   ||||||||     u
 aacuag  guu aaC GAAUCUUGUC CC   AAUUgaau     a
a      ua   u   A          A  GAA        uugua 


Annotation confidence Not enough data
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Genome context
chr2L: 5435195-5435286 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from dsi-mir-964
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-964-5p

Accession MIMAT0012475
Description Drosophila simulans dsi-miR-964-5p mature miRNA
Sequence 16 - UUAGAAUAGGGGAGCUUAACUU - 37
Evidence experimental
Illumina [1]

Mature dsi-miR-964-3p

Accession MIMAT0012476
Description Drosophila simulans dsi-miR-964-3p mature miRNA
Sequence 56 - UUAAAAGCCACUGUUCUAAGAC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9