miRBase entry: dsi-mir-970

Stem-loop dsi-mir-970


Accession
MI0011762
Description
Drosophila simulans dsi-mir-970 precursor miRNA
Gene family
MIPF0000700; mir-970


Sequence

gugaacguaaucguaaggcaucuguugcAGCUAGCGGGUGUUUUAUUUGGUAgcugaauugauuugaaucuaUCAUAAGACACACGCGGCUAUaaccgaugucuaaaugcuuca
....(((....))).(((((((.((((.((((.(((.((((((((..((((((.(.((.....)).)..)))))))))))))).))))))).)))).)))))))..........

Structure
gugaacguaaucgua       u    c    A   G        UU      -c g  u 
               aggcauc guug AGCU GCG GUGUUUUA  UGGUAg  u aa u
               ||||||| |||| |||| ||| ||||||||  ||||||  | || g
               ucuguag caaU UCGG CGC CACAGAAU  ACUauc  a uu a
-----acuucguaaa       c    A    -   A        --      ua g  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature dsi-miR-970-5p

Accession MIMAT0012487
Description Drosophila simulans dsi-miR-970-5p mature miRNA
Sequence 29 - AGCUAGCGGGUGUUUUAUUUGGUA - 52
Evidence experimental
Illumina [1]

Mature dsi-miR-970-3p

Accession MIMAT0012488
Description Drosophila simulans dsi-miR-970-3p mature miRNA
Sequence 73 - UCAUAAGACACACGCGGCUAU - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9