miRBase entry: dsi-mir-1011

Stem-loop dsi-mir-1011


Accession
MI0011771
Description
Drosophila simulans dsi-mir-1011 precursor miRNA
Gene family
MIPF0000969; mir-1011


Sequence

ugaccgugcacgugaguuuuugagccaggaauauaguucuuaUUAUUGGUUCAAAUCGCUCGCAGaauccacccuggcaa
((.(((((...((((((.((((((((((.((((.......)))).))))))))))..))))))......)))...)))).

Structure
-  a  ---   ---cac      -u          g    ua 
 ug cc   gug      gugagu  uuugagccag aaua  g
 || ||   |||      ||||||  |||||||||| ||||  u
 ac gg   cac      CGCUCG  AAACUUGGUU UUau  u
a  -  ucc   cuaaGA      CU          A    uc 


Annotation confidence Not enough data
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Genome context
chr3R: 4780978-4781057 [+]

Database links

Mature dsi-miR-1011

Accession MIMAT0012500
Description Drosophila simulans dsi-miR-1011 mature miRNA
Sequence 43 - UUAUUGGUUCAAAUCGCUCGCAG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9