miRBase entry: dsi-mir-2577

Stem-loop dsi-mir-2577


Accession
MI0011778
Description
Drosophila simulans dsi-mir-2577 precursor miRNA


Sequence

caguucgguucauggggauggcguuggucgcuugacuugaguguguaagccgacaguggguuacaccccaauuuuacaauuccAGGACCGAUCCGAUCCCCAGGAaucgacugu
((((.((((((.(((((((.(.(((((((.((.((.((((((((((((.((......)).))))))....)))...))).)).))))))))).).))))))).)))))))))).

Structure
-    u      a       g c       g  u  c   ---   ----      g  ga 
 cagu cgguuc uggggau g guugguc cu ga uug   agu    guguaa cc  c
 |||| |||||| ||||||| | ||||||| || || |||   |||    |||||| ||   
 guca gcuaAG ACCCCUA C UAGCCAG GA cu aac   uua    cacauu gg  a
u    -      G       G C       -  c  u   auu   accc      g  ug 


Annotation confidence Not enough data
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Genome context
chr2L: 14256237-14256350 [-]

Database links

Mature dsi-miR-2577

Accession MIMAT0012509
Description Drosophila simulans dsi-miR-2577 mature miRNA
Sequence 84 - AGGACCGAUCCGAUCCCCAGGA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9