Stem-loop sequence mtr-MIR169k

Accession

MI0011795 (change log)

Description

Medicago truncatula miR169k stem-loop

Gene family

MIPF0001058; MIR169_6

Literature search

12 open access papers mention mtr-MIR169k
(49 sentences)

Stem-loop

   ga   u     g  ug   u    c             cg   u     u 
5'   agg agaga ag  gau ugag caggauggcuugc  gca gcauu u
     ||| ||||| ||  ||| |||| |||||||||||||  ||| |||||  
3'   ucc uuucu uc  uua acuc guucuaccgggcg  cgu ugugg a
   uc   -     a  gu   c    u             au   -     g 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0011795

Mature sequence mtr-miR169k

• Accession: MIMAT0013248
• Sequence: 21 - ugagccaggauggcuugccgg - 41
• Evidence: experimental; 454 [1]

References

1. PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).