miRBase entry: mtr-MIR2587e

Stem-loop mtr-MIR2587e


Accession
MI0011803
Description
Medicago truncatula mtr-MIR2587e precursor miRNA
Gene family
MIPF0000835; MIR2587


Sequence

cgguggugucauggucauugUUGACCGUUCAUAUGAACCCUGcaauagcauugcagcuugugugggguucauauaacggucaacagagaccauugacaucaaaga
(..(((((((((((((.((((((((((((.((((((((((((((..(((......)))..)))))))))))))))))))))))))).))))).))))))))..).

Structure
- gg        -     a            C              au   au 
 c  ugguguca ugguc uugUUGACCGUU AUAUGAACCCUGca  agc  u
 |  |||||||| ||||| |||||||||||| ||||||||||||||  |||   
 g  acuacagu accag gacaacuggcaa uauacuuggggugu  ucg  g
a aa        u     a            -              gu   ac 


Annotation confidence Not enough data
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Genome context
chr2: 12099555-12099659 [-]

Database links

Mature mtr-miR2587e

Accession MIMAT0013256
Description Medicago truncatula mtr-miR2587e mature miRNA
Sequence 21 - UUGACCGUUCAUAUGAACCCUG - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796