miRBase entry: mtr-MIR2587f

Stem-loop mtr-MIR2587f


Accession
MI0011804
Description
Medicago truncatula mtr-MIR2587f precursor miRNA
Gene family
MIPF0000835; MIR2587


Sequence

cgguggugucauggucauugUUGACCGUUCAUAUGAACCCUGcaauagcauugcagcuugugugggguucauauaacggucaacagagacucuugacaucaaaga
(..((((((((.((((.((((((((((((.((((((((((((((..(((......)))..)))))))))))))))))))))))))).))))..))))))))..).

Structure
- gg        -u    a            C              au   au 
 c  ugguguca  gguc uugUUGACCGUU AUAUGAACCCUGca  agc  u
 |  ||||||||  |||| |||||||||||| ||||||||||||||  |||   
 g  acuacagu  ucag gacaacuggcaa uauacuuggggugu  ucg  g
a aa        uc    a            -              gu   ac 


Annotation confidence Not enough data
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Genome context
chr4: 41213267-41213371 [-]

Database links

Mature mtr-miR2587f

Accession MIMAT0013257
Description Medicago truncatula mtr-miR2587f mature miRNA
Sequence 21 - UUGACCGUUCAUAUGAACCCUG - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796