Stem-loop sequence bmo-mir-989a

AccessionMI0012205 (change log)
Previous IDsbmo-mir-989
DescriptionBombyx mori miR-989 stem-loop
Gene family MIPF0000885; mir-989
Literature search

3 open access papers mention bmo-mir-989a
(4 sentences)

   g       g    a  gg       c     -gu     g  - au 
5'  guucagg uuga au  ccauuac ucaca   cacgu gu c  g
    ||||||| |||| ||  ||||||| |||||   ||||| || |   
3'  uaggucc agcu ug  ggugaug agugu   gugca ca g  a
   a       -    c  aa       c     agu     a  u gu 
Get sequence
Deep sequencing
309 reads, 0 reads per million, 3 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (ASM15162v1; GCA_000151625.1) Overlapping transcripts
NW_004582008.1: 14748776-14748866 [-]
NW_004622344.1: 425-515 [+]
Database links

Mature sequence bmo-miR-989a

Accession MIMAT0012633
Previous IDsbmo-miR-989

56 - 


 - 76

Get sequence
Deep sequencing309 reads, 3 experiments
Evidence experimental; cloned [1], Illumina [2], RTPCR [3]
Database links


PMID:19699294 "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome" Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J Genomics. 94:438-444(2009).
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).
PMID:19823945 "Computational identification and characteristics of novel microRNAs from the silkworm (Bombyx mori L.)" Huang Y, Zou Q, Tang SM, Wang LG, Shen XJ Mol Biol Rep. 37:3171-3176(2010).