Stem-loop sequence bmo-mir-2774a-2

Accession

MI0012347 (change log)

Description

Bombyx mori miR-2774a-2 stem-loop

Gene family

MIPF0000829; mir-2774

Literature search

1 open access papers mention bmo-mir-2774a-2
(2 sentences)

Stem-loop

   acaaca   uuc    c   gg          aaua 
5'       aca   ggac guc  ucuaccgagc    u
         |||   |||| |||  ||||||||||     
3'       ugu   ccug uag  agguggcucg    c
   uauuac   uuc    c   -a          ccca 

Deep sequencing

1054 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (ASM15162v1; GCA_000151625.1): NW_004581960.1: 1970-2042 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012347

Mature sequence bmo-miR-2774a

• Accession: MIMAT0013658
• Sequence: 44 - cucgguggaagaucgucccu - 63
• Deep sequencing: 3097 reads, 3 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000421959_7091

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).