miRBase entry: bmo-mir-2780c

Stem-loop bmo-mir-2780c


Accession
MI0012451
Description
Bombyx mori bmo-mir-2780c precursor miRNA
Gene family
MIPF0000828; mir-2780


Sequence

374 reads, 59 reads per million, 3 experiments
ccacggugaaAAGGGCGUUAAAUGAAGACUUAGggcuucgggcauauccaagaaaaacaggacaucguuugaaugcucgucuaaugga
(((....((...(((((((((((((.(.(((....(((.((......)))))......))).).))))))).)))))).))...))).

Structure
-   cggu  aAA      -       A A   --AGgg   c  gc 
 cca    ga   GGGCGU UAAAUGA G CUU      cuu gg  a
 |||    ||   |||||| ||||||| | |||      ||| ||   
 ggu    cu   cucgua guuugcu c gga      gaa cc  u
a   -aau  --g      a       a a   caaaaa   -  ua 


Annotation confidence Low
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Genome context
NW_004582097.1: 19396-19483 [+]

Database links

Mature bmo-miR-2780c

Accession MIMAT0013760
Description Bombyx mori bmo-miR-2780c mature miRNA
Sequence 11 - AAGGGCGUUAAAUGAAGACUUAG - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148