Stem-loop bmo-mir-2848

Accession

MI0012469

Description

Bombyx mori bmo-mir-2848 precursor miRNA

Sequence

40 reads, 16 reads per million, 3 experiments

ugccgcuaccaaccuugagauaugaguaaauggcugcccuacccuucaaaccggaacgcauuacugcUUCGCGGCAGAAAUAGGCAAAguggugguac
(((((((((...((.................)).((((.((...(((...((((((.(((....)))))).)))..))).))))))..))))))))).

Structure

-         caaccuugagauaugaguaaauggc    c  ccc   aaa   -   c   u 
 ugccgcuac                         ugcc ua   uuc   ccg gaa gca u
 |||||||||                         |||| ||   |||   ||| ||| |||  
 augguggug                         ACGG AU   AAG   GGC CUU cgu a
c         -----------------------AA    -  --A   -AC   G   -   c 

Annotation confidence Not enough data

Genome context

NW_004581681.1: 1082038-1082135 [+]

Mature bmo-miR-2848

• Accession: MIMAT0013770
• Description: Bombyx mori bmo-miR-2848 mature miRNA
• Sequence: 68 - UUCGCGGCAGAAAUAGGCAAA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148