miRBase entry: mdo-mir-26-1

Stem-loop mdo-mir-26-1


Accession
MI0012492
Description
Monodelphis domestica mdo-mir-26-1 precursor miRNA
Gene family
MIPF0000043; mir-26


Sequence

171580 reads, 2900 reads per million, 5 experiments
UUCAAGUAAUCCAGGAUAGGCuguguccagcugcgggCCUAUCCUUGAUUGCUUGUUUCuggagguggc
..(((((((((.((((((((((.(((......))))))))))))).)))))))))..............

Structure
------------UU         C          g   cc 
              CAAGUAAUC AGGAUAGGCu ugu  a
              ||||||||| |||||||||| |||   
              GUUCGUUAG UCCUAUCCgg gcg  g
cgguggagguCUUU         U          -   uc 


Annotation confidence High
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Genome context
NW_001583875.1: 213879-213947 [-]

Database links

Mature mdo-miR-26-5p

Accession MIMAT0012736
Description Monodelphis domestica mdo-miR-26-5p mature miRNA
Sequence 1 - UUCAAGUAAUCCAGGAUAGGC - 21
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mdo-miR-26-1-3p

Accession MIMAT0031031
Description Monodelphis domestica mdo-miR-26-1-3p mature miRNA
Sequence 38 - CCUAUCCUUGAUUGCUUGUUUC - 59
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45