miRBase entry: mdo-mir-429

Stem-loop mdo-mir-429


Accession
MI0012497
Description
Monodelphis domestica mdo-mir-429 precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

3969 reads, 110 reads per million, 4 experiments
gauuggugucuuaccagacaaaguuagaucucgcuauuucugucUAAUACUGUCUGGUAAUGCCauugguca
((((((((.(((((((((((..(((((((............)))))))..)))))))))).).)))))))).

Structure
-        u -          aa       cucgc 
 gauuggug c uuaccagaca  guuagau     u
 |||||||| | ||||||||||  |||||||      
 cugguuaC G AAUGGUCUGU  UAAUcug     a
a        C U          CA       ucuuu 


Annotation confidence High
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Genome context
chr4: 389175425-389175496 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-429
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-429

Accession MIMAT0012741
Description Monodelphis domestica mdo-miR-429 mature miRNA
Sequence 45 - UAAUACUGUCUGGUAAUGCC - 64
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39