miRBase entry: mdo-mir-205a

Stem-loop mdo-mir-205a


Accession
MI0012506
Description
Monodelphis domestica mdo-mir-205a precursor miRNA
Gene family
MIPF0000058; mir-205


Sequence

150 reads, 4 reads per million, 4 experiments
cuugUCCUUCAUUCCACCGGAGUCUGucucauaucuaaucagauuucaguggagugaagcauaagaggcaug
(((((.(((((((((((.((((((((.............)))))))).))))))))))).))))).......

Structure
-------     C           C        ucuca 
       cuugU CUUCAUUCCAC GGAGUCUG     u
       ||||| ||||||||||| ||||||||     a
       gaaua gaagugaggug cuuuagac     u
guacgga     c           a        uaauc 


Annotation confidence Not enough data
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Genome context
chr2: 116544495-116544566 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-205a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-205a

Accession MIMAT0012749
Description Monodelphis domestica mdo-miR-205a mature miRNA
Sequence 5 - UCCUUCAUUCCACCGGAGUCUG - 26
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39