miRBase entry: mdo-mir-215

Stem-loop mdo-mir-215


Accession
MI0012508
Description
Monodelphis domestica mdo-mir-215 precursor miRNA
Gene family
MIPF0000063; mir-192


Sequence

427 reads, 25 reads per million, 2 experiments
guaagaaaugguguguaggaaaAUGACCUAUGAAUUGACAGACAuuauauuuaaaguuugucugucauuucuguaggccaaugccuuguaugucugugcugcu
(((.(..((((((((.(((....((.((((((((.(((((((((..............))))))))).))).))))).))...)))..)))).)))).)))).

Structure
-   a aa    -    -u   aaaA  A     -   U         uuauau 
 gua g  augg ugug  agg    UG CCUAU GAA UGACAGACA      u
 ||| |  |||| ||||  |||    || ||||| ||| |||||||||       
 cgu c  uguc guau  ucc    ac ggaug cuu acugucugu      u
u   - -g    u    gu   -gua  c     u   u         uugaaa 


Annotation confidence Not enough data
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Genome context
chr2: 130471225-130471327 [-]

Database links

Mature mdo-miR-215

Accession MIMAT0012751
Description Monodelphis domestica mdo-miR-215 mature miRNA
Sequence 23 - AUGACCUAUGAAUUGACAGACA - 44
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39