miRBase entry: mdo-mir-455

Stem-loop mdo-mir-455


Accession
MI0012509
Description
Monodelphis domestica mdo-mir-455 precursor miRNA
Gene family
MIPF0000129; mir-455


Sequence

263 reads, 7 reads per million, 5 experiments
ucccuggcgugagggUAUGUGCCCUUGGACUACAUCGuggaagccaacaccAUGCAGUCCAUGGGCAUAUACAcuugccucaagguu
.((.(((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).))).))..

Structure
-u  c   c     g          U      A   C   gaa 
  cc ugg gugag gUAUGUGCCC UGGACU CAU Gug   g
  || ||| ||||| |||||||||| |||||| ||| |||    
  gg acu cguuc CAUAUACGGG ACCUGA GUA cac   c
uu  a   c     A          U      C   c   aac 


Annotation confidence High
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Genome context
chr1: 451465629-451465715 [-]

Database links

Mature mdo-miR-455-5p

Accession MIMAT0012752
Description Monodelphis domestica mdo-miR-455-5p mature miRNA
Sequence 16 - UAUGUGCCCUUGGACUACAUCG - 37
Evidence experimental
Illumina [2]

Mature mdo-miR-455-3p

Accession MIMAT0026942
Description Monodelphis domestica mdo-miR-455-3p mature miRNA
Sequence 52 - AUGCAGUCCAUGGGCAUAUACA - 73
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45